Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929577.1_cds_XP_016476840.1_68632
CDS Infomation

[gene=LOC107798380] [db_xref=GeneID:107798380] [protein=AAA-ATPase At3g50940-like] [protein_id=XP_016476840.1] [location=join(22960..23937,24723..25211)] [gbkey=CDS]
Sequence

ATGGCTCCTGAATTAGATATGGCTAATGTTAAAGCTGTTGTCTCTACTGTTGCCTCTGTT
GCTGCTACAGCAATGCTAGTTCGTACCATAGCAAATGATTTCATTCCAAAAGAATTCCGA
AGCTACATTTTCGACAGTTTCCACGACATTTTTCGTCGTTTTTCTTCTCAATTCACCATT
CTTATCCATGAATTTCAAGGACCATCCCCGAACCTGGTGTTCGAGGCAGTAGAAGTTTAT
TTAGGAACCATAGTGAACTCTTCAACTAAGAGTATTCGATTAGGAAAGACGGAGAATGAC
AAGAATCTTGTCGTTACAATGGATAAAGACGAAGAGATCATCGATGTTTTTGAGAATATT
AAGGTAACATGGAGAATGGAGTGTAGGCGAATCGAGTCAGGGAGCCAGAATGACGAGATA
AGAGATATGATTGCTGCATTAAGTAGTGAACTTAGATGTTATGAGTTGAGTTTTCACAAG
AAACATAAGGAACTGGTATTGAAGACGTACCTGCCTTACATTATGGAGCGATCAAAGGCC
GCGAAAGAAGAATCCAGGGTTATAAAATTGTATTCGAATTTCAGAAACTGGGGTTCTGAT
GGTATGAATCTTGAACATCCTATGACATTTGATACTCTGGCCATGGACAAAGAGATCAAG
AACGCGTTAATTGATGATTTGGCTTGTTTTGGTAAGGGGAAAGATTACTACAATCGGATT
GGGAAACCTTGGAAACGAGGTTATTTGTTATATGGTCCTCCTGGAACTGGTAAATCGAGT
TTGATTGCTGCTATGGCCAATCATTTGAACTATGATATCTATGATTTGGATCTTACTGAA
GTTCGTAGCAATTCAAATCTACGATCGTTGTTACTTGGCATGTCGAGCCGTTCAATTCTT
GTGATCGAGGACATTGACTGCAGTATCAAGCTAGAAAACAGAGAAAAAGAGGAAGAAAAG
GAAAATAAGCACAACAGGGTGACACTGTCGGGAATACTTAATTTTCTTGATGGGATTTGG
TCGTGTTGTGGAGAGGAACGGATAATCGTTGTCACGACCAACCACATAGATAAACTGGAC
GCAGCACTGCTGCGTCCAGGTAGAATGGATATGCACATTCACATGTCATATTGCAAGTTA
TCCGCGTTCAAGCAACTGGTTTTCAATTACTTGAGAATTCAAGAACATGAATTGTTTGAT
CAGATTGGACAACTCTTAGAAGCAGTGGAAGTTACTCCTGCAGAAGTTGCAGGAGAACTG
TTAAAGAGCAAGAATCCAAATATATCTCTTCAAAATCTTATTGAATTTCTTCAAAACAAA
ATTGCAGAAAATAAGATGAAAATTGAGGTGGATTTGACAATGCAGAATGAGAAACCAGAG
GAAGAACCAAAGGATACAACAAATCCTGAATCTACACTTGACTCTTCTGAGAAGCTCATG
GCCGCAGAGACGAAGCTAGCCTATTAG

Peptide Sequence

PEP ID

XP_016476840.1
PEP Infomation

PREDICTED: AAA-ATPase At3g50940-like [Nicotiana tabacum]
Sequence

MAPELDMANVKAVVSTVASVAATAMLVRTIANDFIPKEFRSYIFDSFHDIFRRFSSQFTI
LIHEFQGPSPNLVFEAVEVYLGTIVNSSTKSIRLGKTENDKNLVVTMDKDEEIIDVFENI
KVTWRMECRRIESGSQNDEIRDMIAALSSELRCYELSFHKKHKELVLKTYLPYIMERSKA
AKEESRVIKLYSNFRNWGSDGMNLEHPMTFDTLAMDKEIKNALIDDLACFGKGKDYYNRI
GKPWKRGYLLYGPPGTGKSSLIAAMANHLNYDIYDLDLTEVRSNSNLRSLLLGMSSRSIL
VIEDIDCSIKLENREKEEEKENKHNRVTLSGILNFLDGIWSCCGEERIIVVTTNHIDKLD
AALLRPGRMDMHIHMSYCKLSAFKQLVFNYLRIQEHELFDQIGQLLEAVEVTPAEVAGEL
LKSKNPNISLQNLIEFLQNKIAENKMKIEVDLTMQNEKPEEEPKDTTNPESTLDSSEKLM
AAETKLAY

Transcript Sequence

Gene sequence data has not been registered.